Cost-effectiveness analysis of the use of comprehensive molecular profiling before initiating monoclonal antibody therapy against metastatic colorectal cancer in Japan.
Saito, S., Kameyama, H., Muneoka, Y., Okuda, S., Wakai, T., Akazawa, K. Cost-effectiveness analysis of the use of comprehensive molecular profiling before initiating monoclonal antibody therapy against metastatic colorectal cancer in Japan. J. Cancer Policy 12:61-66 (2017).
Journal of Cancer Policy
Controlling false discovery rate in accumulated public proteome dataset.
Yoshizawa, A. C., Tabata, T., Moriya, Y., Kawano, S., Okuda, S., Watanabe, Y., Yamamoto, T., Matsumoto, M., Takami, T., Kobayashi, D., Araki, N., Sugiyama, N., Tanaka, S., Goto, S., Ishihama, Y. Controlling false discovery rate in accumulated public proteome dataset. ASMS2017, Indianapolis (2017/6/5).
Genome-Wide Target Analyses of Otx2 Homeoprotein in Postnatal Cortex.
Sakai, A., Nakato, R., Ling, Y., Hou, X., Hara, N., Iijima, T., Yanagawa, Y., Kuwano, R., Okuda, S., Shirahige, K., and Sugiyama, S. Genome-Wide Target Analyses of Otx2 Homeoprotein in Postnatal Cortex. Front. Neurosci. 11:307 (2017).
Molecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum.
Yamada, C., Gotoh, A., Sakanaka, M., Hattie, M., Stubbs, K. A., Katayama-Ikegami, A., Hirose, J., Kurihara, S., Arakawa, T., Kitaoka, M., Okuda, S., Katayama, T., Fushinobu, S. Molecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum. Cell Chem. Biol. 24(4):515-524.e5 (2017).
Poly(ADP-ribose) polymerase inhibitors activate the p53 signaling pathway in neural stem/progenitor cells.
Okuda, A., Kurokawa, S., Takehashi, M., Maeda, A., Fukuda, K., Kubo, Y., Nogusa, H., Takatani-Nakase, T., Okuda, S., Ueda, K., Tanaka, S. Poly(ADP-ribose) polymerase inhibitors activate the p53 signaling pathway in neural stem/progenitor cells. BMC Neurosci. 18(1):14 (2017).
jPOSTrepo: an international standard data repository for proteomes.
Okuda, S., Watanabe, Y., Moriya, Y., Kawano, S., Yamamoto, T., Matsumoto, M., Takami, T., Kobayashi, D., Araki, N., Yoshizawa, A. C., Tabata, T., Sugiyama, N., Goto, S., and Ishihama, Y. jPOSTrepo: an international standard data repository for proteomes. Nucleic Acids Res. 45:D1107-D1111 (2017).
The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition.
Deutsch, E. W., Csordas, A., Sun, Z., Jarnuczak, A., Perez-Riverol, Y., Ternent, T., Campbell, D. S., Bernal-Llinares, M., Okuda, S., Kawano, S., Moritz, R. L., Carver, J. J., Wang, M., Ishihama, Y., Bandeira, N., Hermjakob, H., Vizcaíno, J. A. The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition. Nucleic Acids Res. 45:D1100-1106 (2017).
Genomic landscape of colorectal cancer in Japan: clinical implications of comprehensive genomic sequencing for precision medicine.
Nagahashi, M., Wakai, T., Shimada, Y., Ichikawa, H., Kameyama, H., Kobayashi, T., Sakata, J., Yagi, R., Sato, N., Kitagawa, Y., Uetake, H., Yoshida, K., Oki, E., Kudo, S.E., Izutsu, H., Kodama, K., Nakada, M., Tse, J., Russell, M., Heyer, J., Powers, W., Sun, R., Ring, J. E., Takabe, K., Protopopov, A., Ling, Y., Okuda, S., Lyle, S. Genomic landscape of colorectal cancer in Japan: clinical implications of comprehensive genomic sequencing for precision medicine. Genome Med. 8(1):136 (2016).
An adenylyl cyclase with a phosphodiesterase domain in basal plants with a motile sperm system.
Kasahara, M., Suetsugu, N., Urano, Y., Yamamoto, C., Ohmori, M., Takada, Y., Okuda, S., Nishiyama, T., Sakayama, H., Kohchi, T., Takahashi, F. An adenylyl cyclase with a phosphodiesterase domain in basal plants with a motile sperm system. Sci. Rep. 6:39232 (2016).
GlycoEpitope: A Practical Guide to Using Glycomics Databases.
Shujiro Okuda, Hiromi Nakao and Toshisuke Kawasaki GlycoEpitope: A Practical Guide to Using Glycomics Databases. 227-245 (2016). (ISBN: 978-4-431-56452-2)