Use of Gifu Anaerobic Medium for culturing 32 dominant species of human gut microbes and its evaluation based on short-chain fatty acids fermentation profiles.
Gotoh, A., Nara, M., Sugiyama, Y., Sakanaka, M., Yachi, H., Kitakata, A., Nakagawa, A., Minami, H., Okuda, S., Katoh, T., Katayama, T., Kurihara, S. Use of Gifu Anaerobic Medium for culturing 32 dominant species of human gut microbes and its evaluation based on short-chain fatty acids fermentation profiles. Biosci. Biotechnol. Biochem. 81(10):2009-2017.
Molecular analysis of receptacle formation in Sargassum horneri.
Yoshikawa, S., Hosokawa, M., Uwai, S., Okuda, S., Kasahara, M., Takahashi, F. Molecular analysis of receptacle formation in Sargassum horneri. APPF2017, Kuala Lumpur (2017/10/10).
Development of an accurate intermediate-size indel detection tool for discovery of mutations associated with human disease.
Shigemizu, D., Miya, F., Akiyama, S., Okuda, S., Boroevich, K. A., Fujimoto, A., Nakagawa, H., Ozaki, K., Niiga, S., Kanemura, Y., Okamoto, N., Saitoh, S., Kato, M., Yamasaki, M., Matsunaga, T., Mutai, H., Kosaki, K., Tsunoda, T. Development of an accurate intermediate-size indel detection tool for discovery of mutations associated with human disease. IIBMP2017 (2017/9/27).
jPOST provides a global public data repository for a wide variety of proteomics experiments.
Okuda, S., Watanabe, Y., Moriya, Y., Kawano, S., Yamamoto, T., Matsumoto, M., Takami, T., Kobayashi, D., Araki, N., Yoshizawa, A. C., Tabata, T., Sugiyama, N., Tanaka, S., Goto, S., Ishihama, Y. jPOST provides a global public data repository for a wide variety of proteomics experiments. HUPO2017, Dublin (2017/9/17).
Development of integrated proteomics database: jPOST.
Moriya, Y., Kawano, S., Okuda, S., Watanabe, Y., Yamamoto, T., Matsumoto, M., Takami, T., Kobayashi, D., Araki, N., Yoshizawa, A. C., Tabata, T., Sugiyama, N., Tanaka, S., Goto, S., Ishihama, Y. Development of integrated proteomics database: jPOST. HUPO2017, Dublin (2017/9/17).
Reducing false positive identifications for proteome datasets accumulated in jPOST repository.
Yoshizawa, A. C., Tabata, T., Moriya, Y., Kawano, S., Okuda, S., Watanabe, Y., Yamamoto, T., Matsumoto, M., Takami, T., Kobayashi, D., Araki, N., Sugiyama, N., Tanaka, S., Goto, S., Ishihama, Y. Reducing false positive identifications for proteome datasets accumulated in jPOST repository. HUPO2017, Dublin (2017/9/17).
Utility of comprehensive genomic sequencing for detecting HER2-positive colorectal cancer.
Shimada, Y., Yagi, R., Kameyama, H., Nagahashi, M., Ichikawa, H., Tajima, Y., Okamura, T., Nakano, M., Nakano, M., Sato, Y., Matsuzawa, T., Sakata, J., Kobayashi, T., Nogami, H., Maruyama, S., Takii, Y., Kawasaki, T., Homma, K. I., Izutsu, H., Kodama, K., Ring, J. E., Protopopov, A., Lyle, S., Okuda, S., Akazawa, K., Wakai, T. Utility of comprehensive genomic sequencing for detecting HER2-positive colorectal cancer. Hum. Pathol. 66:1-9(2017).
Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer.
Shimada, Y., Kameyama, H., Nagahashi, M., Ichikawa, H., Muneoka, Y., Yagi, R., Tajima, Y., Okamura, T., Nakano, M., Sakata, J., Kobayashi, T., Nogami, H., Maruyama, S., Takii, Y., Hayashida, T., Takaishi, H., Kitagawa, Y., Oki, E., Konishi, T., Ishida, F., Kudo, S. E., Ring, J. E., Protopopov, A., Lyle, S., Ling, Y., Okuda, S., Ishikawa, T., Akazawa, K., Takabe, K., Wakai, T. Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer. Oncotarget 8(55):93567-93579 (2017).
Inhibition of dipeptidyl peptidase-4 ameliorates cardiac ischemia and systolic dysfunction by up-regulating the FGF-2/EGR-1 pathway.
Suda, M., Shimizu, I., Yoshida, Y., Hayashi, Y., Ikegami, R., Katsuumi, G., Wakasugi, T., Yoshida, Y., Okuda, S., Soga, T., Minamino, T. Inhibition of dipeptidyl peptidase-4 ameliorates cardiac ischemia and systolic dysfunction by up-regulating the FGF-2/EGR-1 pathway. PLoS One 12(8):e0182422 (2017).
Inference of microbial interactions from human gut meta genome data.
Watanabe, Y., Ling, Y., Okuda, S. Inference of microbial interactions from human gut meta genome data. ISMB/ECCB2017, Plague (2017/7/25).