Reducing false positive identifications for proteome datasets accumulated in jPOST repository.
Yoshizawa, A. C., Tabata, T., Moriya, Y., Kawano, S., Okuda, S., Watanabe, Y., Yamamoto, T., Matsumoto, M., Takami, T., Kobayashi, D., Araki, N., Sugiyama, N., Tanaka, S., Goto, S., Ishihama, Y. Reducing false positive identifications for proteome datasets accumulated in jPOST repository. HUPO2017, Dublin (2017/9/17).
Utility of comprehensive genomic sequencing for detecting HER2-positive colorectal cancer.
Shimada, Y., Yagi, R., Kameyama, H., Nagahashi, M., Ichikawa, H., Tajima, Y., Okamura, T., Nakano, M., Nakano, M., Sato, Y., Matsuzawa, T., Sakata, J., Kobayashi, T., Nogami, H., Maruyama, S., Takii, Y., Kawasaki, T., Homma, K. I., Izutsu, H., Kodama, K., Ring, J. E., Protopopov, A., Lyle, S., Okuda, S., Akazawa, K., Wakai, T. Utility of comprehensive genomic sequencing for detecting HER2-positive colorectal cancer. Hum. Pathol. 66:1-9(2017).
Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer.
Shimada, Y., Kameyama, H., Nagahashi, M., Ichikawa, H., Muneoka, Y., Yagi, R., Tajima, Y., Okamura, T., Nakano, M., Sakata, J., Kobayashi, T., Nogami, H., Maruyama, S., Takii, Y., Hayashida, T., Takaishi, H., Kitagawa, Y., Oki, E., Konishi, T., Ishida, F., Kudo, S. E., Ring, J. E., Protopopov, A., Lyle, S., Ling, Y., Okuda, S., Ishikawa, T., Akazawa, K., Takabe, K., Wakai, T. Comprehensive genomic sequencing detects important genetic differences between right-sided and left-sided colorectal cancer. Oncotarget 8(55):93567-93579 (2017).
Inhibition of dipeptidyl peptidase-4 ameliorates cardiac ischemia and systolic dysfunction by up-regulating the FGF-2/EGR-1 pathway.
Suda, M., Shimizu, I., Yoshida, Y., Hayashi, Y., Ikegami, R., Katsuumi, G., Wakasugi, T., Yoshida, Y., Okuda, S., Soga, T., Minamino, T. Inhibition of dipeptidyl peptidase-4 ameliorates cardiac ischemia and systolic dysfunction by up-regulating the FGF-2/EGR-1 pathway. PLoS One 12(8):e0182422 (2017).
Inference of microbial interactions from human gut meta genome data.
Watanabe, Y., Ling, Y., Okuda, S. Inference of microbial interactions from human gut meta genome data. ISMB/ECCB2017, Plague (2017/7/25).
Cost-effectiveness analysis of the use of comprehensive molecular profiling before initiating monoclonal antibody therapy against metastatic colorectal cancer in Japan.
Saito, S., Kameyama, H., Muneoka, Y., Okuda, S., Wakai, T., Akazawa, K. Cost-effectiveness analysis of the use of comprehensive molecular profiling before initiating monoclonal antibody therapy against metastatic colorectal cancer in Japan. J. Cancer Policy 12:61-66 (2017).
Journal of Cancer Policy
Controlling false discovery rate in accumulated public proteome dataset.
Yoshizawa, A. C., Tabata, T., Moriya, Y., Kawano, S., Okuda, S., Watanabe, Y., Yamamoto, T., Matsumoto, M., Takami, T., Kobayashi, D., Araki, N., Sugiyama, N., Tanaka, S., Goto, S., Ishihama, Y. Controlling false discovery rate in accumulated public proteome dataset. ASMS2017, Indianapolis (2017/6/5).
Genome-Wide Target Analyses of Otx2 Homeoprotein in Postnatal Cortex.
Sakai, A., Nakato, R., Ling, Y., Hou, X., Hara, N., Iijima, T., Yanagawa, Y., Kuwano, R., Okuda, S., Shirahige, K., and Sugiyama, S. Genome-Wide Target Analyses of Otx2 Homeoprotein in Postnatal Cortex. Front. Neurosci. 11:307 (2017).
Molecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum.
Yamada, C., Gotoh, A., Sakanaka, M., Hattie, M., Stubbs, K. A., Katayama-Ikegami, A., Hirose, J., Kurihara, S., Arakawa, T., Kitaoka, M., Okuda, S., Katayama, T., Fushinobu, S. Molecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum. Cell Chem. Biol. 24(4):515-524.e5 (2017).
Poly(ADP-ribose) polymerase inhibitors activate the p53 signaling pathway in neural stem/progenitor cells.
Okuda, A., Kurokawa, S., Takehashi, M., Maeda, A., Fukuda, K., Kubo, Y., Nogusa, H., Takatani-Nakase, T., Okuda, S., Ueda, K., Tanaka, S. Poly(ADP-ribose) polymerase inhibitors activate the p53 signaling pathway in neural stem/progenitor cells. BMC Neurosci. 18(1):14 (2017).