Obesity-Related Gut Microbiota Aggravates Alveolar Bone Destruction in Experimental Periodontitis through Elevation of Uric Acid.
Sato, K., Yamazaki, K., Kato, T., Nakanishi, Y., Tsuzuno, T., Yokoji-Takeuchi, M., Yamada-Hara, M., Miura, N., Okuda, S., Ohno, H., Yamazaki, K. Obesity-Related Gut Microbiota Aggravates Alveolar Bone Destruction in Experimental Periodontitis through Elevation of Uric Acid. mBio 12(3):e0077121(2021).
Profiling of host genetic alterations and intra-tumor microbiomes in colorectral cancer.
Okuda, S., Shimada, Y., Tajima, Y., Yuza, K., Hirose, Y., Ichikawa, H., Nagahashi, M., Sakata, J., Ling, Y., Miura, N., Sugai, M., Watanabe, Y., Takeuchi, S., Wakai, T. Profiling of host genetic alterations and intra-tumor microbiomes in colorectal cancer. Comput. Struct. Biotechnol. J. 19:3330-3338(2021).
Extracellular DNA of slow growers of mycobacteria and its contribution to biofilm formation and drug tolerance.
IIinov, A., Nishiyama, A., Namba, H., Fukushima, Y., Takihara, H., Nakajima, C., Savitskaya, A., Gebretsadik, G., Hakamata, M., Ozeki, Y., Tateishi, Y., Okuda, S., Suzuki, Y., Vinnik Y. S., Matsumoto, S. Extracellular DNA of slow growers of mycobacteria and its contribution to biofilm formation and drug tolerance. Sci. Rep. 11(1):10953(2021).
Three-dimensional understanding of the morphological complexity of the human uterine endometrium.
Yamaguchi, M., Yoshihara, K., Suda, K., Nakaoka, H., Yachida, N., Ueda,H., Sugino, K., Mori, Y., Yamawaki, K., Tamura, R., Ishiguro, T., Motoyama, T., Watanabe, Y., Okuda, S., Tainaka, K., Enomoto, T. Three-dimensional understanding of the morphological complexity of the human uterine endometrium. iScience 24(4):102258(2021).
Adipose most abundant 2 protein is a predictive marker for cisplatin sensitivity in cancers.
Kamimura, K., Suda, T., Fukuhara, Y., Okuda, S., Watanabe, Y., Yokoo, T., Osaki, A., Waguri,N., Ishikawa, T., Sato, T., Aoyagi, Y., Takamura, M., Wakai, T., Terai, S. Adipose most abundant 2 protein is a predictive marker for cisplatin sensitivity in cancers. Sci. Rep. 11(1):6255(2021).
The jPOST Repository as a Public Data Repository for Shotgun Proteomics.
Watanabe, Y., Yoshizawa, A. C., Ishihama, Y., Okuda, S. The jPOST Repository as a Public Data Repository for Shotgun Proteomics. Methods Mol. Biol. 2259:309-322(2021).
Mutational signatures in squamous cell carcinoma of the lung.
Osoegawa, A., Takada, K., Okamoto, T., Sato, S., Nagahashi, M., Tagawa, T., Tsuchida, M., Oki, E., Okuda, S., Wakai, T., Mori, M. Mutational signatures in squamous cell carcinoma of the lung. J. Thorac. Dis. 13(2):1075-1082(2021).
GlycoPOST realizes FAIR principles for glycomics mass spectrometry data.
Watanabe, Y., Aoki-Kinoshita, K. F., Ishihama, Y., Okuda, S. GlycoPOST realizes FAIR principles for glycomics mass spectrometry data. Nucleic Acids Res. 49(D1):D1523-D1528(2021).
p62/SQSTM1-droplet serves as a platform for autophagosome formation and anti-oxidative stress response.
Kageyama, S., Gudmundsson, S. R., Sou, Y-S., Ichimura, Y., Tamura, N., Kazuno, S., Ueno, T., Miura, Y., Noshiro, D., Abe, M., Mizushima, T., Miura, N., Okuda, S., Motohashi, H., Lee, J-A., Sakimura, K., Ohe, T., Noda, N. N., Waguri, S., Eskelinen, E-L., Komatsu, M. p62/SQSTM1-droplet serves as a platform for autophagosome formation and anti-oxidative stress response. Nat. commun. 12(1):16(2021).
Sphingosine Kinase 1 is Associated With Immune Cell-Related Gene Expressions in Human Breast Cancer.
Tsuchida, J., Nagahashi, M., Nakajima, M., Katsuta, E., Rashid, O. M., Qi, Q., Yan, L., Okuda, S., Takabe, K., and Wakai, T. Sphingosine Kinase 1 is Associated With Immune Cell-Related Gene Expressions in Human Breast Cancer. J. Surg. Res. 256:645-656(2020).