Unique transcriptional profile of native persisters in Escherichia coli
Matsumoto, S., Kawai, Y., Miyagawa, S., Iwamoto, Y., Okuda, S., Sanchez-Gorostiaga, A., Vicente, M., and Tsuneda, S. Unique transcriptional profile of native persisters in Escherichia coli. J. Biosci. Bioeng. S1389-1723(17):30461-30469 (2017).
Use of Gifu Anaerobe Medium as a Standard Medium for Culture of 32 Dominant Species of Human Gut Microbes for in silico Pathway Analysis and Quantification of Short-Chain Fatty Acids in the Culture Supernatants
Gotoh, A., Nara, M., Sugiyama, Y., Sakanaka, M., Yachi, H., Kitakata, A., Nakagawa, A., Minami, H., Okuda, S., Katayama, T., and Kurihara, S. Use of Gifu Anaerobe Medium as a Standard Medium for Culture of 32 Dominant Species of Human Gut Microbes for in silico Pathway Analysis and Quantification of Short-Chain Fatty Acids in the Culture Supernatants. Biosci. Biotechnol. Biochem. 7:1-9 (2017).
Inhibition of Dipeptidyl peptidase-4 ameliorates cardiac ischemia and systolic dysfunction by up-regulating the FGF-2/EGR-1 pathway
Suda, M., Shimizu, I., Yoshida, Y., Hayashi, Y., Ikegami, R., Katsuumi, G., Wakasugi, T., Yoshida, Y., Okuda, S., Soga, T., and Minamino, T. Inhibition of Dipeptidyl peptidase-4 ameliorates cardiac ischemia and systolic dysfunction by up-regulating the FGF-2/EGR-1 pathway. PLoS ONE 12(8):e0182422 (2017).
Inference of microbial interactions from human gut meta genome data.
Watanabe, Y., Ling, Y. and Okuda, S. Inference of microbial interactions from human gut meta genome data. ISMB/ECCB2017, Plague (2017/7)
Cost-effectiveness analysis of the use of comprehensive molecular profiling before initiating monoclonal antibody therapy against metastatic colorectal cancer.
Saito, S., Kameyama, H., Muneoka, Y., Okuda, S., Wakai, T., and Akazawa, K. Cost-effectiveness analysis of the use of comprehensive molecular profiling before initiating monoclonal antibody therapy against metastatic colorectal cancer. Journal of Cancer Policy 12:61-66 (2017).
Journal of Cancer Policy
Controlling false discovery rate in accumulated public proteome dataset.
Yoshizawa, A. C., Tabata, T., Moriya, Y., Kawano, S., Okuda, S., Watanabe, Y., Yamamoto, T., Matsumoto, M., Takami, T., Kobayashi, D., Araki, N., Sugiyama, N., Tanaka, S., Goto, S., and Ishihama, Y. Controlling false discovery rate in accumulated public proteome dataset. ASMS2017, Indianapolis (2017/6/5)
Genome-wide Target Analyses of Otx2 Homeoprotein In Postnatal Cortex
Sakai, A., Nakato, R., Ling, Y., Hou, X., Hara, N., Iijima, T., Yanagawa, Y., Kuwano, R., Okuda, S., Shirahige, K., and Sugiyama S. Genome-wide Target Analyses of Otx2 Homeoprotein In Postnatal Cortex. Frontiers in Neuroscience 11:307 (2017).
Evolutionary insight into symbiosis between Bifidobacterium longum and breast-fed infants gained by molecular analysis of lacto-N-biosidase.
Yamada,C., Gotoh, A., Sakanaka, M., Hattie, M., Stubbs, K. A., Katayama-Ikegami, A., Hirose, J., Kurihara, S., Arakawa,T., Kitaoka, M., Okuda, S., Katayama, K., and Fushinobu, S. Evolutionary insight into symbiosis between Bifidobacterium longum and breast-fed infants gained by molecular analysis of lacto-N-biosidase. Cell Chem. Biol. 24(4):515-524 (2017).
PubMed Cell Chemical Biology
Utility of comprehensive genomic sequencing for detecting HER2-positive colorectal cancer.
Shimada, Y., Yagi, R., Kameyama, H., Nagahashi, M., Ichikawa, H., Tajima, Y., Okamura, T., Nakano M., Nakano, M., Sato, Y., Matsuzawa, T., Sakata, J., Kobayashi, T., Nogami, H., Maruyama, S., Takii, Y., Kawasaki, T., Homma, K., Izutsue, H., Kodamae, K., Ring, J. E., Protopopov, A., Lyle, S., Okuda, S., Akazawa, K., and Wakai, T. Utility of comprehensive genomic sequencing for detecting HER2-positive colorectal cancer. Human Pathology S0046-8177(17):30051-30055.(2017).
PubMed Human Pathology
Poly(ADP-ribose) Polymerase Inhibitors Activate the p53 Signaling Pathway in Neural Stem/Progenitor Cells.
Okuda, A., Kurokawa, S., Takehashi, M., Maeda, A., Fukuda, K., Kubo, Y., Nogusa, H., Takatani-Nakase, T., Okuda, S., Ueda, K., and Tanaka, S. Poly(ADP-ribose) Polymerase Inhibitors Activate the p53 Signaling Pathway in Neural Stem/Progenitor Cells. BMC Neurosci. 18(1):14 (2017).