Lactobacillus rhamnosus GG consumption characteristically modulate gut microbial composition of healthy Japanese subjects. -a randomized, double-blind, placebo-controlled study.
Harata, G., Miyazawa, K., Yoda, K., Yamazaki, K., He, F., Hiramatsu, M., Okuda, S. Lactobacillus rhamnosus GG consumption characteristically modulate gut microbial composition of healthy Japanese subjects. -a randomized, double-blind, placebo-controlled study. ISAPP2018, Singapore (2018/6/5).
AldB controls persister formation in Escherichia coli depending on environmental stress.
Kawai, Y., Matsumoto, S., Ling, Y., Okuda, S., Tsuneda, S. AldB controls persister formation in Escherichia coli depending on environmental stress. Microbiol. Immunol. 62(5):299-309 (2018).
Genome-wide analysis of single nucleotide variants on phosphorylation motifs.
Yoshizaki, H., Ling Y., Kohno, M., Okuda, S. Genome-wide analysis of single nucleotide variants on phosphorylation motifs. ASBMB2018, San Diego (2018/4/25).
IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis.
Shigemizu, D., Miya, F., Akiyama, S., Okuda, S., Boroevich, K. A., Fujimoto, A., Nakagawa, H., Ozaki, K., Niida, S., Kanemura, Y., Okamoto, N., Saitoh, S., Kato, M., Yamasaki, M., Matsunaga, T., Mutai, H., Kosaki, K., Tsunoda, T. IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis. Sci. Rep. 8(1):10367 (2018).
Unique transcriptional profile of native persisters in Escherichia coli.
Matsumoto, S., Kawai, Y., Miyagawa, S., Iwamoto, Y., Okuda, S., Sanchez-Gorostiaga, A., Vicente, M., Tsuneda, S. Unique transcriptional profile of native persisters in Escherichia coli. J. Biosci. Bioeng. 125(1):15-22 (2018).
Novel therapeutic strategy for cervical cancer harboring FGFR3-TACC3 fusions.
Tamura, R., Yoshihara, K., Saito, T., Ishimura, R., Martínez- Ledesma, J. E., Xin, H., Ishiguro, T., Mori, Y., Yamawaki, K., Suda, K., Sato, S., Itamochi, H., Motoyama, T., Aoki, Y., Okuda, S., Casingal, C. R., Nakaoka, H., Inoue, I., Verhaak, R. G. W., Komatsu, M., Enomoto, T. Novel therapeutic strategy for cervical cancer harboring FGFR3-TACC3 fusions. Oncogenesis 7(1):4 (2018).
Impact of Concurrent Genomic Alterations Detected by Comprehensive Genomic Sequencing on Clinical Outcomes in East-Asian Patients with EGFR-Mutated Lung Adenocarcinoma.
Sato, S., Nagahashi, M., Koike, T., Ichikawa, H., Shimada, Y., Watanabe, S., Kikuchi, T., Takada, K., Nakanishi, R., Oki, E., Okamoto, T., Akazawa, K., Lyle, S., Ling, Y., Takabe, K., Okuda, S., Wakai, T., Tsuchida, M. Impact of Concurrent Genomic Alterations Detected by Comprehensive Genomic Sequencing on Clinical Outcomes in East-Asian Patients with EGFR-Mutated Lung Adenocarcinoma. Sci. Rep. 8(1):1005 (2018).
Comprehensive analysis of polyamine transport and biosynthesis in the dominant human gut bacteria: Potential presence of novel polyamine metabolism and transport genes.
Sugiyama, Y., Nara, M., Sakanaka, M., Gotoh, A., Kitakata, A., Okuda, S., Kurihara, S. Comprehensive analysis of polyamine transport and biosynthesis in the dominant human gut bacteria: Potential presence of novel polyamine metabolism and transport genes. Int. J. Biochem. Cell Biol. 93:52-61 (2017).
PubMed The International Journal of Biochemistry & Cell Biology
Rare PDCD11 variations are not associated with risk of schizophrenia in Japan.
Hoya, S., Watanabe, Y., Hishimoto, A., Nunokawa, A., Kaneko, N., Muratake, T., Shinmyo, N., Otsuka, I., Okuda, S., Inoue, E., Igeta, H., Shibuya, M., Egawa, J., Orime, N., Sora, I., Someya, T. Rare PDCD11 variations are not associated with risk of schizophrenia in Japan. Psychiatry Clin. Neurosci. 71(11): 780-788 (2017).
Actionable gene-based classification toward precision medicine in gastric cancer.
Ichikawa, H., Nagahashi, M., Shimada, Y., Hanyu, T., Ishikawa, T., Kameyama, H., Kobayashi, T., Sakata, J., Yabusaki, H., Nakagawa, S., Sato, N., Hirata, Y., Kitagawa, Y., Tanahashi, T., Yoshida, K., Nakanishi, R., Oki, E., Vuzman, D., Lyle, S., Takabe, K., Ling, Y., Okuda, S., Akazawa, K., Wakai, T. Actionable gene-based classification toward precision medicine in gastric cancer. Genome Med. 9(1):93 (2017).
PubMed Genome Medicine